University of Sydney Handbooks - 2021 Archive

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Animal Health, Disease and Welfare

Unit outlines will be available through Find a unit outline two weeks before the first day of teaching for 1000-level and 5000-level units, or one week before the first day of teaching for all other units.
 

ANIMAL HEALTH, DISEASE AND WELFARE

Animal Health, Disease and Welfare major

A major in Animal Health, Disease and Welfare requires 48 credit points from this table including:
(i) 12 credit points of 1000-level core units
(ii) 6 credit points of 2000-level core units
(iii) 6 credit points of 2000-level selective units
(iv) 18 credit points of 3000-level major core units
(v) 6 credit points of 3000-level interdisciplinary project units

Animal Health, Disease and Welfare minor

A minor in Animal Health, Disease and Welfare requires 36 credit points from this table including:
(i) 12 credit points of 1000-level core units
(ii) 6 credit points of 2000-level core units
(iii) 6 credit points of 2000-level selective units
(iv) 6 credit points of 3000-level minor core units
(v) 6 credit points of 3000-level minor selective units

Units of study

The units of study are listed below.

1000-level units of study

Core
BIOL1006 Life and Evolution

Credit points: 6 Teacher/Coordinator: Refer to the unit of study outline https://www.sydney.edu.au/units Session: Semester 1 Classes: Refer to the unit of study outline https://www.sydney.edu.au/units Prohibitions: BIOL1001 or BIOL1911 or BIOL1991 or BIOL1906 or BIOL1996 Assumed knowledge: HSC Biology. Students who have not completed HSC Biology (or equivalent) are strongly advised to take the Biology Bridging Course (offered in February). Assessment: Refer to the unit of study outline https://www.sydney.edu.au/units Practical field work: 11 x 3-hour lab classes, 2 field excursions Mode of delivery: Normal (lecture/lab/tutorial) day
Biology is an immensely diverse science. Biologists study life at all levels, from the fundamental building blocks (genes, proteins) to whole ecosystems in which myriads of species interact. Evolution is the unifying concept that runs through the life sciences, from the origin and diversification of life to understanding behaviour, to dealing with disease. Evolution through natural selection is the framework in biology in which specific details make sense. This unit explores how new species continue to arise while others go extinct and discusses the role of mutations as the raw material on which selection acts. It explains how information is transferred between generations through DNA, RNA and proteins, transformations which affect all aspects of biological form and function. Science builds and organises knowledge of life and evolution in the form of testable hypotheses. You will participate in inquiry-led practical classes investigating single-celled organisms and the diversity of form and function in plants and animals. By doing this unit of study, you will develop the ability to examine novel biological systems and understand the complex processes that have shaped those systems.
Textbooks
Knox, B., Ladiges, P.Y., Evans, B.K., Saint, R. (2014) Biology: an Australian focus, 5e, McGraw-Hill education, North Ryde, N.S.W
BIOL1906 Life and Evolution (Advanced)

Credit points: 6 Teacher/Coordinator: Refer to the unit of study outline https://www.sydney.edu.au/units Session: Semester 1 Classes: Refer to the unit of study outline https://www.sydney.edu.au/units Prohibitions: BIOL1001 or BIOL1911 or BIOL1991 or BIOL1006 or BIOL1996 Assumed knowledge: 85 or above in HSC Biology or equivalent. Assessment: Refer to the unit of study outline https://www.sydney.edu.au/units Practical field work: 11 x 3-hour lab classes, 3 field excursions Mode of delivery: Normal (lecture/lab/tutorial) day
Note: Department permission required for enrolment
Biology is an immensely diverse science. Biologists study life at all levels, from the fundamental building blocks (genes, proteins) to whole ecosystems in which myriads of species interact. Evolution is the unifying concept that runs through the life sciences, from the origin and diversification of life to understanding behaviour, to dealing with disease. Evolution through natural selection is the framework in biology in which specific details make sense. This unit explores how new species continue to arise while others go extinct and discusses the role of mutations as the raw material on which selection acts. It explains how information is transferred between generations through DNA, RNA and proteins, transformations which affect all aspects of biological form and function. Science builds and organises knowledge of life and evolution in the form of testable hypotheses. You will participate in inquiry-led practical classes investigating single-celled organisms and the diversity of form and function in plants and animals.
Life and Evolution (Advanced) has the same overall structure as BIOL1006 but material is discussed in greater detail and at a more advanced level. Students enrolled in BIOL1906 participate in an authentic urban biodiversity management research project with a focus on developing skills in critical evaluation, experimental design, data analysis and communication.
Textbooks
Knox, B., Ladiges, P.Y., Evans, B.K., Saint, R. (2014) Biology: an Australian focus, 5e, McGraw-Hill education, North Ryde, N.S.W
BIOL1996 Life and Evolution (SSP)

Credit points: 6 Teacher/Coordinator: Refer to the unit of study outline https://www.sydney.edu.au/units Session: Semester 1 Classes: Refer to the unit of study outline https://www.sydney.edu.au/units Prohibitions: BIOL1001 or BIOL1911 or BIOL1991 or BIOL1006 or BIOL1906 or BIOL1993 or BIOL1998 Assumed knowledge: 90 or above in HSC Biology or equivalent Assessment: Refer to the unit of study outline https://www.sydney.edu.au/units Mode of delivery: Normal (lecture/lab/tutorial) day
Note: Department permission required for enrolment
Biology is an immensely diverse science. Biologists study life at all levels, from the fundamental building blocks (genes, and proteins) to whole ecosystems in which myriad species interact. Evolution is the unifying concept that runs through the life sciences, from the origin and diversification of life to understanding behaviour, to dealing with disease. Evolution through natural selection is the framework in biology in which specific details make sense. Science builds and organises knowledge of life and evolution in the form of testable hypotheses. The practical work syllabus for BIOL1996 is different from that of BIOL1906 (Advanced) and consists of a special project-based laboratory.
Textbooks
Please see unit outline on LMS
BIOL1007 From Molecules to Ecosystems

Credit points: 6 Teacher/Coordinator: Refer to the unit of study outline https://www.sydney.edu.au/units Session: Intensive February,Semester 2 Classes: Refer to the unit of study outline https://www.sydney.edu.au/units Prohibitions: BIOL1907 or BIOL1997 Assumed knowledge: HSC Biology. Students who have not completed HSC Biology (or equivalent) are strongly advised to take the Biology Bridging Course (offered in February). Assessment: Refer to the unit of study outline https://www.sydney.edu.au/units Mode of delivery: Block mode
Paradigm shifts in biology have changed the emphasis from single biomolecule studies to complex systems of biomolecules, cells and their interrelationships in ecosystems of life. Such an integrated understanding of cells, biomolecules and ecosystems is key to innovations in biology. Life relies on organisation, communication, responsiveness and regulation at every level. Understanding biological mechanisms, improving human health and addressing the impact of human activity are the great challenges of the 21st century. This unit will investigate life at levels ranging from cells, and biomolecule ecosystems, through to complex natural and human ecosystems. You will explore the importance of homeostasis in health and the triggers that lead to disease and death. You will learn the methods of cellular, biomolecular, microbial and ecological investigation that allow us to understand life and discover how expanding tools have improved our capacity to manage and intervene in ecosystems for our own health and organisms in the environment that surround and support us . You will participate in inquiry-led practicals that reinforce the concepts in the unit. By doing this unit you will develop knowledge and skills that will enable you to play a role in finding global solutions that will impact our lives.
BIOL1907 From Molecules to Ecosystems (Advanced)

Credit points: 6 Teacher/Coordinator: Refer to the unit of study outline https://www.sydney.edu.au/units Session: Semester 2 Classes: Refer to the unit of study outline https://www.sydney.edu.au/units Prohibitions: BIOL1007 or BIOL1997 Assumed knowledge: 85 or above in HSC Biology or equivalent Assessment: Refer to the unit of study outline https://www.sydney.edu.au/units Mode of delivery: Normal (lecture/lab/tutorial) day
Note: Department permission required for enrolment
Paradigm shifts in biology have changed the emphasis from single biomolecule studies to complex systems of biomolecules, cells and their interrelationships in ecosystems of life. Such an integrated understanding of cells, biomolecules and ecosystems is key to innovations in biology. Life relies on organisation, communication, responsiveness and regulation at every level. Understanding biological mechanisms, improving human health and addressing the impact of human activity are the great challenges of the 21st century. This unit will investigate life at levels ranging from cells, and biomolecule ecosystems, through to complex natural and human ecosystems. You will explore the importance of homeostasis in health and the triggers that lead to disease and death. You will learn the methods of cellular, biomolecular, microbial and ecological investigation that allow us to understand life and discover how expanding tools have improved our capacity to manage and intervene in ecosystems for our own health and organisms in the environment that surround and support us . This unit of study has the same overall structure as BIOL1007 but material is discussed in greater detail and at a more advanced level. The content and nature of these components may vary from year to year.
Textbooks
Please see unit outline on LMS
BIOL1997 From Molecules to Ecosystems (SSP)

Credit points: 6 Teacher/Coordinator: Refer to the unit of study outline https://www.sydney.edu.au/units Session: Semester 2 Classes: Refer to the unit of study outline https://www.sydney.edu.au/units Prohibitions: BIOL1007 or BIOL1907 Assumed knowledge: 90 or above in HSC Biology or equivalent Assessment: Refer to the unit of study outline https://www.sydney.edu.au/units Mode of delivery: Normal (lecture/lab/tutorial) day
Note: Department permission required for enrolment
Paradigm shifts in biology have changed the emphasis from single biomolecule studies to complex systems of biomolecules, cells and their interrelationships in ecosystems of life. Such an integrated understanding of cells, biomolecules and ecosystems is key to innovations in biology. Life relies on organisation, communication, responsiveness and regulation at every level. Understanding biological mechanisms, improving human health and addressing the impact of human activity are the great challenges of the 21st century. This unit will investigate life at levels ranging from cells, and biomolecule ecosystems, through to complex natural and human ecosystems. You will explore the importance of homeostasis in health and the triggers that lead to disease and death. You will learn the methods of cellular, biomolecular, microbial and ecological investigation that allow us to understand life and intervene in ecosystems to improve health. The same theory will be covered as in the advanced stream but in this Special Studies Unit, the practical component is a research project. The research will be a synthetic biology project investigating genetically engineered organisms. Students will have the opportunity to develop higher level generic skills in computing, communication, critical analysis, problem solving, data analysis and experimental design.
Textbooks
Please see unit outline on LMS

2000-level units of study

Core
AVBS2001 Introductory Veterinary Pathogenesis

Credit points: 6 Teacher/Coordinator: Refer to the unit of study outline https://www.sydney.edu.au/units Session: Semester 2 Classes: Refer to the unit of study outline https://www.sydney.edu.au/units Prerequisites: (BIOL1XX7 or MBLG1XX1) and (BIOL1XX1 or BIOL1XX2 or BIOL1XX6 or AVBS1XXX) Assumed knowledge: The basic structure, morphology, metabolism and behaviour of bacteria, viruses, and fungi. Fundamental histological structure and function of cells and key tissues, including blood vessels, skin, liver, lung, kidneys, intestine, and organs and cells of the immune system (lymph node, spleen, white blood cells). Assessment: Refer to the unit of study outline https://www.sydney.edu.au/units Mode of delivery: Normal (lecture/lab/tutorial) day
The overarching theme for this unit of study is the concept of the interaction between the host (or the animal), the agent of disease (genetics, physical, chemical and infectious agents) and environmental factors. In disease states, the host responds to the aetiological agent of disease and the environment through one of the basic five pathological processes that occur in tissues. These include inflammation and repair, degeneration and necrosis, circulatory disturbances, tissue deposits and pigments, and disorders of growth. A case based approach will be used whenever possible to illustrate these principles and enable the student to develop a problem solving approach and the skills of critical thinking.
Textbooks
See unit of study guide.
Selective
(MEDS coded units of study are only available to students in the Medical Science stream).
IMMU2011 Immunobiology

Credit points: 6 Teacher/Coordinator: Dr Umaimainthan Palendira Session: Semester 1 Classes: Refer to the unit of study outline https://www.sydney.edu.au/units Prerequisites: BIOL1XX7 or (BIOL1XX8 or BIOL1XX3 or MEDS1X01) or BIOL1XX2 or MBLG1XX1 Prohibitions: IMMU2911 Assumed knowledge: CHEM1XX1 or CHEM1903 Assessment: Refer to the unit of study outline https://www.sydney.edu.au/units Practical field work: Refer to the unit of study outline https://www.sydney.edu.au/units Mode of delivery: Normal (lecture/lab/tutorial) day
Note: Refer to the unit of study outline https://www.sydney.edu.au/units
Immunobiology is the study of defence mechanisms that protect living organisms against life-threatening infections. In this unit of study you will explore the essential features of the host immune responses mounted by animals, both vertebrates and invertebrates, plants and microbes themselves. Studies in animal and microbial immunobiology are leading to breakthroughs in veterinary and clinical medicine, including combatting infectious diseases, maximising transplant success, treating allergies, autoimmune diseases and cancer, as well as the development of new vaccines to prevent disease. Understanding the immunobiology of plants also enables us to protect crops from disease which enhances our food security. In this unit of study you will be provided with an overview of immunobiology as a basic research science. We will explore the nature of the immune cells and molecules that recognise danger and how the immune system of animals and plants respond at the cellular and molecular level. Practical and tutorial sessions are designed to illustrate particular concepts introduced in other face-to-face activities. Further self-directed learning activities, including online learning activities, will facilitate integration of fundamental information and help you apply this knowledge to the ways in which the host organism defends against disease. Upon completion, you will have developed the foundations to undertake further studies in Biology, Animal Health, Immunology and Pathology. Ultimately, this could lead you to a career in medical research, biosecurity and/or Veterinary Science.
Textbooks
Refer to the unit of study outline https://www.sydney.edu.au/units
IMMU2911 Immunobiology (Advanced)

Credit points: 6 Teacher/Coordinator: Dr Umaimainthan Palendira Session: Semester 1 Classes: Refer to the unit of study outline https://www.sydney.edu.au/units Prerequisites: A mark of 70 or above in [BIOL1XX7 or (BIOL1XX8 or BIOL1XX3 or MEDS1X01) or BIOL1XX2 or MBLG1XX1] Prohibitions: IMMU2011 Assumed knowledge: CHEM1XX1 or CHEM1903 Assessment: Refer to the unit of study outline https://www.sydney.edu.au/units Practical field work: Refer to the unit of study outline https://www.sydney.edu.au/units Mode of delivery: Normal (lecture/lab/tutorial) day
Note: Refer to the unit of study outline https://www.sydney.edu.au/units
Immunobiology is the study of defence mechanisms that protect living organisms against life-threatening infections. In this unit of study you will explore the essential features of the host immune responses and how it evolved from unicellular organisms to complex multi-cellular organisms. Studies in animal and microbial immunobiology are leading to breakthroughs in veterinary and clinical medicine, including combatting infectious diseases, maximising transplant success, treating allergies, autoimmune diseases and cancer, as well as development of new vaccines to prevent disease. Understanding the immunobiology of plants also enables us to protect crops from disease which enhances our food security. In this unit of study you will be provided with a detailed overview of immunobiology as a basic research science. We will explore in detail the nature of the immune cells and molecules that recognise danger and how the immune system of animals and plants respond at the cellular and molecular level. Advanced practical and tutorial sessions are designed to illustrate particular concepts introduced in other face-to-face activities. Further self-directed learning activities, including online learning activities, will facilitate integration of fundamental information and help you apply this knowledge to the ways in which the host organism defends against disease. This advanced version of Immunobiology has the same overall concepts as the mainstream unit but material is discussed in a manner that offers a greater level of challenge and academic rigour. Students enrolled in the advanced stream will participate in alternative components which may for example include guest lectures from experts. The nature of these components may vary from year to year.
Textbooks
Refer to the unit of study outline https://www.sydney.edu.au/units
MEDS2004 Microbes, Infection and Immunity

Credit points: 6 Teacher/Coordinator: Refer to the unit of study outline https://www.sydney.edu.au/units Session: Semester 2 Classes: Refer to the unit of study outline https://www.sydney.edu.au/units Prerequisites: BIOL1XX3 or BIOL1XX7 or BIOL1X08 or MEDS1X01 or MBLG1XX1 Prohibitions: MIMI2002 or MIMI2902 or MICR2021 or MICR2921 or MICR2022 or MICR2922 or IMMU2101 or BMED2404 or BMED2807 or BMED2808 Assumed knowledge: Human biology (BIOL1XX3 or BIOL1XX8 or MEDS1X01) and biological chemistry (CHEM1XX1 or CHEM1903) Assessment: Refer to the unit of study outline https://www.sydney.edu.au/units Mode of delivery: Normal (lecture/lab/tutorial) day
Transmission, pathogenicity and immune response to microbes are key concepts for understanding infectious disease processes. In this unit of study you will establish a conceptual foundation and, using an integrated approach, explore selected case studies of infection from a body system of origin perspective. You will explore the characteristics of viral, bacterial, fungal and protist pathogens and their virulence mechanisms for establishment and progression of disease. Comprehensive consideration of host immune response and characteristic pathological changes to tissue that arise will then be considered. Upon completion of this unit, you will be able to explain microbial pathogenic processes of infection including: mechanisms for colonisation, invasion and damage to host tissue; the ways in which your immune system recognises and destroys invading microbes; how the T cell response is activated and antibodies function. You will learn about pathogenesis, symptoms, current challenges of treatment including antibiotic resistance, control and vaccination strategies. You will develop a holistic perspective of infectious diseases. You will work collaboratively to solve challenging problems in Biomedical Sciences. Practical classes will investigate normal flora, host defences and case studies of medically important microbes with linkage to disease outcome. You will also obtain experience and understanding of modern experimental techniques in microbiology and immunopathology.
Textbooks
Learning resources will be available via the course Canvas site. Recommended textbooks: Willey, J., Sherwood, L., Woolverton, C., Prescott, L., 2017, Prescott's Microbiology, 10th Edition. McGraw-Hill Australia Pty Ltd, Sydney and Abbas, A., Lichtman, A., Pillai, S. 2016, Basic Immunology: Functions and disorders of the immune system, 5th Edition. Elsevier St. Louis, Missouri, USA.
MICR2031 Microbiology

Credit points: 6 Teacher/Coordinator: Refer to the unit of study outline https://www.sydney.edu.au/units Session: Semester 1 Classes: Refer to the unit of study outline https://www.sydney.edu.au/units Prohibitions: MICR2021 or MICR2921 or MICR2024 or MICR2931 Assumed knowledge: Fundamental concepts of microorganisms, biomolecules and ecosystems; CHEM1XX1 Assessment: Refer to the unit of study outline https://www.sydney.edu.au/units Mode of delivery: Normal (lecture/lab/tutorial) day
Microbes are essential for every aspect of life on the planet. Microbes in the human gut control our digestion and our immune system, microbes in the soil are required for plant growth, microbes in the ocean fix more carbon dioxide than all the earth's trees. This unit of study will investigate the diversity and activity of microorganisms - viruses, bacteria, fungi, algae and protozoa - and look at how they interact with us, each other, plants and animals. You will examine how microbes underpin healthy ecosystems through nutrient cycling and biodegradation, their use industrially in biotechnology and food production, and their ability to cause harm, producing disease, poisoning, pollution and spoilage. Aspects of microbial ecology, nutrition, physiology and genetics will also be introduced. This unit of study will provide you with the breadth of knowledge and skills needed for further studies of microbiology, and will provide the fundamental understanding of microbes that you will require if you specialise in related fields such as biochemistry, molecular biology, immunology, agriculture, nutrition and food sciences, bioengineering and biotechnology, ecology or science education.
Textbooks
Willey et al, Prescott's Microbiology, 10th edition, McGraw-Hill, 2017
MICR2931 Microbiology (Advanced)

Credit points: 6 Teacher/Coordinator: Refer to the unit of study outline https://www.sydney.edu.au/units Session: Semester 1 Classes: Refer to the unit of study outline https://www.sydney.edu.au/units Prerequisites: A mark of 70 or above in 6cp from (BIOL1XXX or MBLG1XXX) Prohibitions: MICR2021 or MICR2921 or MICR2024 or MICR2031 Assumed knowledge: Fundamental concepts of microorganisms, biomolecules and ecosystems; CHEM1XX1 Assessment: Refer to the unit of study outline https://www.sydney.edu.au/units Mode of delivery: Normal (lecture/lab/tutorial) day
Microbes are essential for every aspect of life on the planet. Microbes in the human gut control our digestion and our immune system, microbes in the soil are required for plant growth, microbes in the ocean fix more carbon dioxide than all the Earth's trees. In this unit of study you will investigate the diversity and activity of microorganisms - viruses, bacteria, fungi, algae and protozoa - and look at how they interact with us, each other, plants and animals. You will examine how microbes underpin healthy ecosystems through nutrient cycling and biodegradation, their use industrially in biotechnology and food production, and their ability to cause harm, producing disease, poisoning, pollution and spoilage. Detailed aspects of microbial ecology, nutrition, physiology and genetics will also be introduced. This unit of study will provide you with the breadth of knowledge and skills needed for further studies of microbiology, and will provide the fundamental understanding of microbes that you will require to specialise in related fields such as biochemistry, molecular biology, immunology, agriculture, nutrition and food sciences, bioengineering and biotechnology, ecology, or science education. As an Advanced unit, MICR2931 provides increased challenge and academic rigour to develop a greater understanding and depth of disciplinary expertise. You will actively participate in a series of small group tutorials investigating the molecular detail of microbial communication and function, which will culminate in you creating a scientific research report that communicates your understanding of recent research in microbiology.
Textbooks
Willey et al, Prescott's Microbiology, 10th edition, McGraw-Hill, 2017
MIMI2002 Microbes, Infection and Immunity

Credit points: 6 Teacher/Coordinator: Refer to the unit of study outline https://www.sydney.edu.au/units Session: Semester 2 Classes: Refer to the unit of study outline https://www.sydney.edu.au/units Prerequisites: (BIOL1XX7 or MBLG1XX1 or BIOL1XX8 or MEDS1X01 or BIOL1XX3) Prohibitions: MEDS2004 or BMED2404 or MIMI2902 or IMMU2101 or MICR2021 or MICR2921 or MICR2022 or MICR2922 or BMED2807 or BMED2808 Assumed knowledge: Human biology (BIOL1XX3 or BIOL1XX8 or MEDS1X01) and biological chemistry (CHEM1XX1 or CHEM1903) Assessment: Refer to the unit of study outline https://www.sydney.edu.au/units Mode of delivery: Normal (lecture/lab/tutorial) day
Transmission, pathogenicity and immune response to microbes are key concepts for understanding infectious disease processes. In this unit of study you will establish a conceptual foundation and, using an integrated approach, explore selected case studies of infection from a body system of origin perspective. You will explore the characteristics of viral, bacterial, fungal and protist pathogens and their virulence mechanisms for establishment and progression of disease. Comprehensive consideration of host immune response and characteristic pathological changes to tissue that arise will then be considered. Upon completion of this unit, you will be able to explain microbial pathogenic processes of infection including: mechanisms for colonisation, invasion and damage to host tissue; the ways in which your immune system recognises and destroys invading microbes; how T cell response is activated and antibodies function. You will learn about pathogenesis, symptoms, current challenges of treatment including antibiotic resistance, control and vaccination strategies. You will develop a holistic perspective of infectious diseases. You will work collaboratively to solve challenging problems in Biomedical Sciences. Practical classes will investigate normal flora, host defences and case studies of medically important microbes with linkage to disease outcome. You will also obtain experience and understanding of modern experimental techniques in microbiology and immunopathology.
Textbooks
Willey, J., Sherwood, L., Woolverton, C., Prescott, L., 2017, Prescott's Microbiology, 10th Edition. McGraw-Hill Australia Pty Ltd, Sydney.
MIMI2902 Microbes, Infection and Immunity (Advanced)

Credit points: 6 Teacher/Coordinator: Refer to the unit of study outline https://www.sydney.edu.au/units Session: Semester 2 Classes: Refer to the unit of study outline https://www.sydney.edu.au/units Prerequisites: A mark of 70 or above in (BIOL1XX7 or MBLG1XX1 or BIOL1XX8 or MEDS1X01 or BIOL1XX3) Prohibitions: MEDS2004 or BMED2404 or MIMI2002 or IMMU2101 or MICR2021 or MICR2921 or MICR2022 or MICR2922 or BMED2807 or BMED2808 Assumed knowledge: Human biology (BIOL1XX3 or BIOL1XX8 or MEDS1X01) and biological chemistry (CHEM1XX1 or CHEM1903) Assessment: Refer to the unit of study outline https://www.sydney.edu.au/units Mode of delivery: Normal (lecture/lab/tutorial) day
Transmission, pathogenicity and immune response to microbes are key concepts for understanding infectious disease processes. In this unit you will establish a conceptual foundation and, using an integrated approach, explore selected infection case studies from a body system of origin perspective. You will explore characteristics of viral, bacterial, fungal and protist pathogens and their virulence mechanisms for establishment and progression of disease. Comprehensive consideration of host immune response and consequent characteristic pathological changes to tissue will be considered. Upon completion, you will be able to explain microbial pathogenic processes of infection including: mechanisms for colonisation, invasion and damage to host tissue; the ways your immune system recognises and destroys invading microbes; how T cell response is activated and antibodies function. You will learn about pathogenesis, symptoms, current challenges of treatment including antibiotic resistance, control and vaccination strategies. This advanced unit has the same overall structure as MIMI2002 but contains a unique science communication exercise in which you will actively participate in small group sessions and be assessed with a short essay. This advanced component explores how recent advances in microbiology, infection and immunity are communicated to the wider public and is based on recent publications with potential high impact for society.

3000-level units of study

Major core
ANSC3106 Animal Behaviour and Welfare Science

Credit points: 6 Teacher/Coordinator: Refer to the unit of study outline https://www.sydney.edu.au/units Session: Semester 2 Classes: Refer to the unit of study outline https://www.sydney.edu.au/units Prerequisites: 48cp of 1000-3000 level units including at least 6cp of (BIOL1XXX or AVBS100X) Assessment: Refer to the unit of study outline https://www.sydney.edu.au/units Practical field work: Practical class activities will be held at The University of Sydney Farms, and there will be a full day excursion to an external site. Mode of delivery: Normal (lecture/lab/tutorial) day
In Animal Behaviour and Welfare Science 3, behavioural theory and the behavioural and physiological responses of animals to stressors related to husbandry, housing, transport and slaughter are explored. This Unit enables students to develop an understanding of applied animal behaviour theory, and the responses of animals to common interventions that arise in the context of interacting with humans, including the domestication of livestock species and the management of wildlife. We introduce a framework for animal welfare assessment, and the principles of animal responses to stress are illustrated with production species as the main examples. An overview of the key behaviour and welfare considerations for performance and companion animals, and wildlife will be provided. Contemporary approaches to the scientific measurement of animal stress and welfare, based on an appropriate selection of scientific disciplines including ethology, psychology, physiology and neuroscience, are assessed with an emphasis on farmed livestock species. Genetic, environmental and evolutionary determinants of pain, stress and fear responses in animals are considered in the light of what is known about cognition and motivation in animals. Methods for assessing and enhancing animal environments and husbandry systems are examined and the impact on animal behaviour and welfare of stockmanship is explored in the context of human-animal interactions. Finally, the design and conduct of scientific experiments are assessed with a focus on animal ethics and current welfare issues.
Textbooks
Broom, DM and Fraser, AF 2007, Domestic animal behaviour and welfare, 4th edition, CAB International, Cambridge Uni Press, Cambridge
AVBS3001 Agents of Disease

Credit points: 6 Teacher/Coordinator: Refer to the unit of study outline https://www.sydney.edu.au/units Session: Semester 1 Classes: Refer to the unit of study outline https://www.sydney.edu.au/units Prerequisites: AVBS2001 Assessment: Refer to the unit of study outline https://www.sydney.edu.au/units Mode of delivery: Normal (lecture/lab/tutorial) day
Various microscopic and macroscopic organism can be seen to interact and adapt to the animal host, many of these interactions can lead to deleterious effects on animal health. The aim of this unit is to examine and appreciate the diversity of various disease causing agents (microbiological and parasitological) of significance to animal industries and the various strategies employed by those agents in the host-pathogen-environment interaction. This study is based on an understanding of the physical, chemical and genetic characteristics of infectious agents of disease and builds on the fundamental knowledge of pathological and immunological processes taught in 2000 level units of the Animal Health, Disesae and Welfare major. A scenario/case based approach will be used whenever possible to enable the students to develop problem solving approaches and skills in critical thinking. Cases selected will be those that best illustrate particular concepts and/or are of particular significance to the animal/veterinary industry. Research and industry focus activities will infuse the subject content and student learning outcomes of this unit. At the completion of the unit you will have acquired detail knowledge of relevant veterinary pathogens and an appreciation of how mangements strategies can impact upon disesae risk in animal populations. You will also gain practical skills in the laboratory diagnosis of many of these infectious agents. This unit is located at the Camperdown campus.
Textbooks
A Unit of Study outline and LMS will contain detailed information and notes for this unit.
AVBS3005 Animal Health and Disease

Credit points: 6 Teacher/Coordinator: Refer to the unit of study outline https://www.sydney.edu.au/units Session: Semester 1 Classes: Refer to the unit of study outline https://www.sydney.edu.au/units Prerequisites: 12 credit points from (AVBS2001 or IMMU2X11 or MEDS2004 or MIMI2X02) or [6 credit points from (AVBS2001 or IMMU2X11 or MEDS2004 or MIMI2X02) and 6cp from (BIOL2XXX or MICR2XXX)] Prohibitions: AVBS4001 Assumed knowledge: The completion of 12 credit points of first year Biology (BIOL1006 and BIOL1007), and microbiology (MICR2031) or immunology (IMMU2011) would be beneficial. Assessment: Refer to the unit of study outline https://www.sydney.edu.au/units Practical field work: To be advised during class. Mode of delivery: Normal (lecture/lab/tutorial) day
The ability for animals to live a healthy and productive life free of disease is essential to sustain farming and natural animal populations. In animal health and disease you will apply principles of animal management to optimise animal health and minimise the incidence and severity of disease, based on host, pathogens and environmental interactions. You will analyse epidemiological approaches to investigate diseases in animal populations and management strategies that are frequently employed to sustain a healthy flock or herd. The management of current diseases relevant to production animals, wildlife and emergency diseases of relevance to Australia, will be explored. You will gain practical experience in the handling and health-based management of cattle, sheep and poultry, and will have the opportunity to visit farms, an animal health research facility or an animal disease diagnostics laboratory. By doing this unit you will be able to explain and justify practical approaches and procedures used to augment animal health and minimise the incidence and severity of disease. In this unit, there is a risk of exposure to zoonotic pathogens. Students should check the unit of study outline for vaccination requirements.
Textbooks
To be advised during classes of each topic area.
Interdisciplinary project
AVBS3888 Laboratory Disease Investigations

Credit points: 6 Teacher/Coordinator: Refer to the unit of study outline https://www.sydney.edu.au/units Session: Semester 2 Classes: Refer to the unit of study outline https://www.sydney.edu.au/units Prerequisites: AVBS2001 and AVBS3001 Assumed knowledge: Fundamental mechanisms of disease, basic microbiology and parasitology, basic epidemiology. Assessment: Refer to the unit of study outline https://www.sydney.edu.au/units Mode of delivery: Normal (lecture/lab/tutorial) day
The laboratory investigation of animal diseases requires an interdisciplinary approach that may involve collaboration between pathologists, microbiologists, geneticists, epidemiologists, biotechnologists, statisticians, livestock managers, ecologists, public health workers, and governmental biosecurity agencies. The ability to identify and explore interdisciplinary links is a crucial skill for emerging professionals and researchers alike. This unit presents the opportunity to bring together the concepts and skills you have learnt in your discipline and work with students from other disciplines to investigate a real-world problem. In this inquiry- based unit, students will engage in projects that engages students in a real-life animal disease-based investigation in collaboration with students from other disciplines, supervised by a range of industry-engaged academics. The focus is on developing interdisciplinary skills, an investigative approach, and critical thinking and analysis in the context of the many faces of animal disease investigation. In this unit, you will continue to understand and explore disciplinary knowledge, while also meeting and collaborating with students from across the University through project-based learning; identifying and solving problems, collecting and analysing data and communicating your findings to a diverse audience. All of these skills are highly valued by employers. This unit will foster the ability to work in interdisciplinary teams, and this is essential for both professional and research pathways in the future.
SCPU3001 Science Interdisciplinary Project

Credit points: 6 Teacher/Coordinator: Refer to the unit of study outline https://www.sydney.edu.au/units Session: Intensive February,Intensive July,Semester 1,Semester 2 Classes: Refer to the unit of study outline https://www.sydney.edu.au/units Prerequisites: 96 credit points Assessment: Refer to the unit of study outline https://www.sydney.edu.au/units Mode of delivery: Normal (lecture/lab/tutorial) day
This interdisciplinary unit provides students with the opportunity to address complex problems identified by industry, community, and government organisations, and gain valuable experience in working across disciplinary boundaries. In collaboration with a major industry partner and an academic lead, students integrate their academic skills and knowledge by working in teams with students from a range of disciplinary backgrounds. This experience allows students to research, analyse and present solutions to a real¿world problem, and to build on their interpersonal and transferable skills by engaging with and learning from industry experts and presenting their ideas and solutions to the industry partner.
Minor core
AVBS3001 Agents of Disease

Credit points: 6 Teacher/Coordinator: Refer to the unit of study outline https://www.sydney.edu.au/units Session: Semester 1 Classes: Refer to the unit of study outline https://www.sydney.edu.au/units Prerequisites: AVBS2001 Assessment: Refer to the unit of study outline https://www.sydney.edu.au/units Mode of delivery: Normal (lecture/lab/tutorial) day
Various microscopic and macroscopic organism can be seen to interact and adapt to the animal host, many of these interactions can lead to deleterious effects on animal health. The aim of this unit is to examine and appreciate the diversity of various disease causing agents (microbiological and parasitological) of significance to animal industries and the various strategies employed by those agents in the host-pathogen-environment interaction. This study is based on an understanding of the physical, chemical and genetic characteristics of infectious agents of disease and builds on the fundamental knowledge of pathological and immunological processes taught in 2000 level units of the Animal Health, Disesae and Welfare major. A scenario/case based approach will be used whenever possible to enable the students to develop problem solving approaches and skills in critical thinking. Cases selected will be those that best illustrate particular concepts and/or are of particular significance to the animal/veterinary industry. Research and industry focus activities will infuse the subject content and student learning outcomes of this unit. At the completion of the unit you will have acquired detail knowledge of relevant veterinary pathogens and an appreciation of how mangements strategies can impact upon disesae risk in animal populations. You will also gain practical skills in the laboratory diagnosis of many of these infectious agents. This unit is located at the Camperdown campus.
Textbooks
A Unit of Study outline and LMS will contain detailed information and notes for this unit.
Minor selective
ANSC3106 Animal Behaviour and Welfare Science

Credit points: 6 Teacher/Coordinator: Refer to the unit of study outline https://www.sydney.edu.au/units Session: Semester 2 Classes: Refer to the unit of study outline https://www.sydney.edu.au/units Prerequisites: 48cp of 1000-3000 level units including at least 6cp of (BIOL1XXX or AVBS100X) Assessment: Refer to the unit of study outline https://www.sydney.edu.au/units Practical field work: Practical class activities will be held at The University of Sydney Farms, and there will be a full day excursion to an external site. Mode of delivery: Normal (lecture/lab/tutorial) day
In Animal Behaviour and Welfare Science 3, behavioural theory and the behavioural and physiological responses of animals to stressors related to husbandry, housing, transport and slaughter are explored. This Unit enables students to develop an understanding of applied animal behaviour theory, and the responses of animals to common interventions that arise in the context of interacting with humans, including the domestication of livestock species and the management of wildlife. We introduce a framework for animal welfare assessment, and the principles of animal responses to stress are illustrated with production species as the main examples. An overview of the key behaviour and welfare considerations for performance and companion animals, and wildlife will be provided. Contemporary approaches to the scientific measurement of animal stress and welfare, based on an appropriate selection of scientific disciplines including ethology, psychology, physiology and neuroscience, are assessed with an emphasis on farmed livestock species. Genetic, environmental and evolutionary determinants of pain, stress and fear responses in animals are considered in the light of what is known about cognition and motivation in animals. Methods for assessing and enhancing animal environments and husbandry systems are examined and the impact on animal behaviour and welfare of stockmanship is explored in the context of human-animal interactions. Finally, the design and conduct of scientific experiments are assessed with a focus on animal ethics and current welfare issues.
Textbooks
Broom, DM and Fraser, AF 2007, Domestic animal behaviour and welfare, 4th edition, CAB International, Cambridge Uni Press, Cambridge
AVBS3888 Laboratory Disease Investigations

Credit points: 6 Teacher/Coordinator: Refer to the unit of study outline https://www.sydney.edu.au/units Session: Semester 2 Classes: Refer to the unit of study outline https://www.sydney.edu.au/units Prerequisites: AVBS2001 and AVBS3001 Assumed knowledge: Fundamental mechanisms of disease, basic microbiology and parasitology, basic epidemiology. Assessment: Refer to the unit of study outline https://www.sydney.edu.au/units Mode of delivery: Normal (lecture/lab/tutorial) day
The laboratory investigation of animal diseases requires an interdisciplinary approach that may involve collaboration between pathologists, microbiologists, geneticists, epidemiologists, biotechnologists, statisticians, livestock managers, ecologists, public health workers, and governmental biosecurity agencies. The ability to identify and explore interdisciplinary links is a crucial skill for emerging professionals and researchers alike. This unit presents the opportunity to bring together the concepts and skills you have learnt in your discipline and work with students from other disciplines to investigate a real-world problem. In this inquiry- based unit, students will engage in projects that engages students in a real-life animal disease-based investigation in collaboration with students from other disciplines, supervised by a range of industry-engaged academics. The focus is on developing interdisciplinary skills, an investigative approach, and critical thinking and analysis in the context of the many faces of animal disease investigation. In this unit, you will continue to understand and explore disciplinary knowledge, while also meeting and collaborating with students from across the University through project-based learning; identifying and solving problems, collecting and analysing data and communicating your findings to a diverse audience. All of these skills are highly valued by employers. This unit will foster the ability to work in interdisciplinary teams, and this is essential for both professional and research pathways in the future.
AVBS3005 Animal Health and Disease

Credit points: 6 Teacher/Coordinator: Refer to the unit of study outline https://www.sydney.edu.au/units Session: Semester 1 Classes: Refer to the unit of study outline https://www.sydney.edu.au/units Prerequisites: 12 credit points from (AVBS2001 or IMMU2X11 or MEDS2004 or MIMI2X02) or [6 credit points from (AVBS2001 or IMMU2X11 or MEDS2004 or MIMI2X02) and 6cp from (BIOL2XXX or MICR2XXX)] Prohibitions: AVBS4001 Assumed knowledge: The completion of 12 credit points of first year Biology (BIOL1006 and BIOL1007), and microbiology (MICR2031) or immunology (IMMU2011) would be beneficial. Assessment: Refer to the unit of study outline https://www.sydney.edu.au/units Practical field work: To be advised during class. Mode of delivery: Normal (lecture/lab/tutorial) day
The ability for animals to live a healthy and productive life free of disease is essential to sustain farming and natural animal populations. In animal health and disease you will apply principles of animal management to optimise animal health and minimise the incidence and severity of disease, based on host, pathogens and environmental interactions. You will analyse epidemiological approaches to investigate diseases in animal populations and management strategies that are frequently employed to sustain a healthy flock or herd. The management of current diseases relevant to production animals, wildlife and emergency diseases of relevance to Australia, will be explored. You will gain practical experience in the handling and health-based management of cattle, sheep and poultry, and will have the opportunity to visit farms, an animal health research facility or an animal disease diagnostics laboratory. By doing this unit you will be able to explain and justify practical approaches and procedures used to augment animal health and minimise the incidence and severity of disease. In this unit, there is a risk of exposure to zoonotic pathogens. Students should check the unit of study outline for vaccination requirements.
Textbooks
To be advised during classes of each topic area.