Unit outline_

BMET5934: Biomedical Machine Learning

Semester 2, 2025 [Normal day] - Camperdown/Darlington, Sydney

Designing artificial intelligence (AI) based systems for solving real world problems is about finding an appropriate AI tool for the task at hand. This unit aims to provide students with the opportunity to work in small groups (3-5 students per group) and design and implement an AI system that solves a real-world biomedical problem. Students will work with large database of multi-sensor biological signals from a public data source such as M.I.T Physionet or National Sleep Research Resource and design AI systems predicting desired biomedical outcomes. For example, the groups may design a system for automatic sleep staging of human sleep using electroencephalogram signals. The unit will emphasise using signal processing/machine learning tools to find practical and effective solutions to the posed biomedical problem.

Unit details and rules

Academic unit Biomedical Engineering
Credit points 6
Prerequisites
? 
None
Corequisites
? 
None
Prohibitions
? 
None
Assumed knowledge
? 

[BMET2960 and (ENGG1810 or INFO1110) and BMET2922] or equivalent study

Available to study abroad and exchange students

Yes

Teaching staff

Coordinator Philip de Chazal, philip.dechazal@sydney.edu.au
The census date for this unit availability is 1 September 2025
Type Description Weight Due Length Use of AI
Written work Lab 2 report
A report on laboratory 2 - ECG sleep apnea database
15% Week 04
Due date: 29 Aug 2025 at 23:59
5-10 pages AI allowed
Outcomes assessed: LO1 LO4 LO5 LO6
In-person written or creative task hurdle task Mid term test
Assessment of course material weeks 1-8.
35% Week 08
Due date: 13 Oct 2025 at 14:00
80 minutes AI prohibited
Outcomes assessed: LO4 LO5 LO6
Presentation group assignment Project presentation
Each group to provide a powerpoint presentation describing their project
10% Week 13
Due date: 03 Nov 2025 at 11:00
15 minutes AI allowed
Outcomes assessed: LO1 LO2 LO5 LO3
Written work Project report (individual)
Written report on individual contribution to the major laboratory project
40% Week 13
Due date: 09 Nov 2025 at 23:59
15-20 pages AI allowed
Outcomes assessed: LO1 LO2 LO4 LO5 LO6 LO3
hurdle task = hurdle task ?
group assignment = group assignment ?

Assessment summary

  • Lab 2 report: Written report on Laboratory 2
  • Mid term exam, In class assessment of course material in weeks 1-8 testing your understanding of concepts and application. The exam will be a mixture of multiple choice and free answer questions. 

    **This is a hurdle task - Students must achieve 45% in this assessment to pass the course. Students may be given additional attempts to pass this hurdle task with appropriate grading. Failure to pass this hurdle task during the semester will result in an AF grade of 49.
     
  • Project presentation: A 15 minute powerpoint presentation describing the approaches and outcomes of the major project. There is one presentation per group
  • Project report, A 15-20 page report detailing your contribution to the major project.

Assessment criteria

Result name

Mark range

Description

High distinction

85 - 100

Exceptional standard.Work demonstrates strong initiative and ingenuity in research, careful critical analysis of material, thoroughness of design, and innovative interpretation of evidence.

Distinction

75 - 84

Superior standard. Work demonstrates initiative in research and reading, strong conceptual understanding and original analysis of the subject matter and its context, both empirical and theoretical.

Credit

65 - 74

Competent standard. Evidence of extensive reading and initiative in research, a sound grasp of the subject matter and an appreciation of the key issues and context.

Pass

50 - 64

Satisfactory/acceptable standard. Work meets basic requirements in terms of reading and research and demonstrates a satisfactory understanding of the subject matter.

Fail

0 - 49

When you don’t meet the learning outcomes of the unit to a satisfactory standard.

 

For more information see guide to grades.

Use of generative artificial intelligence (AI)

You can use generative AI tools for open assessments. Restrictions on AI use apply to secure, supervised assessments used to confirm if students have met specific learning outcomes.

Refer to the assessment table above to see if AI is allowed, for assessments in this unit and check Canvas for full instructions on assessment tasks and AI use.

If you use AI, you must always acknowledge it. Misusing AI may lead to a breach of the Academic Integrity Policy.

Visit the Current Students website for more information on AI in assessments, including details on how to acknowledge its use.

Late submission

In accordance with University policy, these penalties apply when written work is submitted after 11:59pm on the due date:

  • Deduction of 5% of the maximum mark for each calendar day after the due date.
  • After ten calendar days late, a mark of zero will be awarded.

This unit has an exception to the standard University policy or supplementary information has been provided by the unit coordinator. This information is displayed below:

Any written work submitted after 11:59pm on the due date will be penalised by 5% of the maximum awardable mark for each calendar day after the due date. If the assessment is submitted more than ten calendar days late, a mark of zero will be awarded.

Academic integrity

The University expects students to act ethically and honestly and will treat all allegations of academic integrity breaches seriously.

Our website provides information on academic integrity and the resources available to all students. This includes advice on how to avoid common breaches of academic integrity. Ensure that you have completed the Academic Honesty Education Module (AHEM) which is mandatory for all commencing coursework students

Penalties for serious breaches can significantly impact your studies and your career after graduation. It is important that you speak with your unit coordinator if you need help with completing assessments.

Visit the Current Students website for more information on AI in assessments, including details on how to acknowledge its use.

Simple extensions

If you encounter a problem submitting your work on time, you may be able to apply for an extension of five calendar days through a simple extension.  The application process will be different depending on the type of assessment and extensions cannot be granted for some assessment types like exams.

Special consideration

If exceptional circumstances mean you can’t complete an assessment, you need consideration for a longer period of time, or if you have essential commitments which impact your performance in an assessment, you may be eligible for special consideration or special arrangements.

Special consideration applications will not be affected by a simple extension application.

Using AI responsibly

Co-created with students, AI in Education includes lots of helpful examples of how students use generative AI tools to support their learning. It explains how generative AI works, the different tools available and how to use them responsibly and productively.

Support for students

The Support for Students Policy reflects the University’s commitment to supporting students in their academic journey and making the University safe for students. It is important that you read and understand this policy so that you are familiar with the range of support services available to you and understand how to engage with them.

The University uses email as its primary source of communication with students who need support under the Support for Students Policy. Make sure you check your University email regularly and respond to any communications received from the University.

Learning resources and detailed information about weekly assessment and learning activities can be accessed via Canvas. It is essential that you visit your unit of study Canvas site to ensure you are up to date with all of your tasks.

If you are having difficulties completing your studies, or are feeling unsure about your progress, we are here to help. You can access the support services offered by the University at any time:

Support and Services (including health and wellbeing services, financial support and learning support)
Course planning and administration
Meet with an Academic Adviser

WK Topic Learning activity Learning outcomes
Week 01 Course Overview Lecture (2 hr) LO6 LO5 LO4
Week 02 Regression versus classification problems and performance estimation Lecture (2 hr) LO6 LO5 LO4
Laboratory 1: UCL Heart Disease Database Computer laboratory (3 hr) LO6 LO5 LO4 LO3 LO2
Week 03 Biomedical performance metrics Lecture (2 hr) LO6 LO5 LO4
Laboratory 2: ECGapnea database Computer laboratory (3 hr) LO6 LO5 LO4 LO3 LO2
Week 04 Biomedical sensors and feature extraction. Data labelling Lecture (2 hr) LO6 LO5 LO4
Laboratory 2: ECGapnea database Computer laboratory (3 hr) LO6 LO5 LO4 LO3 LO2
Week 05 Biomedical Machine Learning Challenges 1: Using multisensory information Lecture (2 hr) LO6 LO5 LO4
Major project: Designing a system to assess sleep ECG/Oximetry/EEG Computer laboratory (3 hr) LO6 LO5 LO4 LO3 LO2
Week 06 Fast machine learning methods: single pass training algorithms Lecture (2 hr) LO6 LO5 LO4
Major project: Designing a system to assess sleep ECG/Oximetry/EEG Computer laboratory (3 hr) LO6 LO5 LO4 LO3 LO2
Week 07 Biomedical Machine Learning Challenges 2: Highly unbalanced Lecture (2 hr) LO6 LO5 LO4
Major project: Designing a system to assess sleep ECG/Oximetry/EEG Computer laboratory (3 hr) LO6 LO5 LO4 LO3 LO2
Week 08 Biomedical Machine Learning Challenges 3: Cross- sensor information Lecture (2 hr) LO6 LO5 LO4
Major project: Designing a system to assess sleep ECG/Oximetry/EEG Computer laboratory (3 hr) LO6 LO5 LO4 LO3 LO2
Week 09 Mid-term test. Review of leader board for major projects Lecture (2 hr) LO6 LO5 LO4
Major project: Designing a system to assess sleep ECG/Oximetry/EEG Computer laboratory (3 hr) LO6 LO5 LO4 LO3 LO2
Week 10 Major project: Designing a system to assess sleep ECG/Oximetry/EEG Computer laboratory (3 hr) LO6 LO5 LO4 LO3 LO2
Week 11 Group presentations on major projects Lecture (2 hr) LO2 LO1
Major project: Designing a system to assess sleep ECG/Oximetry/EEG Computer laboratory (3 hr) LO6 LO5 LO4 LO3 LO2
Week 12 Over fitting Lecture (2 hr) LO6 LO5 LO4
Major project: Designing a system to assess sleep ECG/Oximetry/EEG Computer laboratory (3 hr) LO6 LO5 LO4 LO3 LO2
Week 13 Performance boosting Lecture (2 hr) LO6 LO5 LO4
Demonstration of major projects Computer laboratory (3 hr) LO2 LO1

Attendance and class requirements

Students are expected to attend and actively engage in all timetabled activities of a unit of study. Students are required to be in attendance at the correct time and place of any formal or informal examinations and scheduled assessments. Non-attendance on any grounds insufficient to claim special consideration will result in the forfeiture of marks associated with the assessment.

Study commitment

Typically, there is a minimum expectation of 1.5-2 hours of student effort per week per credit point for units of study offered over a full semester. For a 6 credit point unit, this equates to roughly 120-150 hours of student effort in total.

Learning outcomes are what students know, understand and are able to do on completion of a unit of study. They are aligned with the University's graduate qualities and are assessed as part of the curriculum.

At the completion of this unit, you should be able to:

  • LO1. Present written reports and make presentations to communicate technical and often complex material in clear and concise terms for a specific target audience.
  • LO2. Develop the ability to work in an interdisciplinary team effectively and efficiently by assuming clearly defined roles and responsibilities and then interacting in a constructive manner with the group by both contributing and evaluating others' viewpoints in a project where devices and software tools are deployed in a health environment.
  • LO3. Conceive and design an innovative health software application
  • LO4. Select signal processing methods on biological signals and appropriate machine learning algorithms to achieve required outcomes.
  • LO5. Explain what physiological signals are and how they are measured. Show proficiency in using state of the art tools and methods to analyse sensing data.
  • LO6. Apply appropriate signal processing and machine learning methods to achieve a practical solution to a real world biomedical problem

Graduate qualities

The graduate qualities are the qualities and skills that all University of Sydney graduates must demonstrate on successful completion of an award course. As a future Sydney graduate, the set of qualities have been designed to equip you for the contemporary world.

GQ1 Depth of disciplinary expertise

Deep disciplinary expertise is the ability to integrate and rigorously apply knowledge, understanding and skills of a recognised discipline defined by scholarly activity, as well as familiarity with evolving practice of the discipline.

GQ2 Critical thinking and problem solving

Critical thinking and problem solving are the questioning of ideas, evidence and assumptions in order to propose and evaluate hypotheses or alternative arguments before formulating a conclusion or a solution to an identified problem.

GQ3 Oral and written communication

Effective communication, in both oral and written form, is the clear exchange of meaning in a manner that is appropriate to audience and context.

GQ4 Information and digital literacy

Information and digital literacy is the ability to locate, interpret, evaluate, manage, adapt, integrate, create and convey information using appropriate resources, tools and strategies.

GQ5 Inventiveness

Generating novel ideas and solutions.

GQ6 Cultural competence

Cultural Competence is the ability to actively, ethically, respectfully, and successfully engage across and between cultures. In the Australian context, this includes and celebrates Aboriginal and Torres Strait Islander cultures, knowledge systems, and a mature understanding of contemporary issues.

GQ7 Interdisciplinary effectiveness

Interdisciplinary effectiveness is the integration and synthesis of multiple viewpoints and practices, working effectively across disciplinary boundaries.

GQ8 Integrated professional, ethical, and personal identity

An integrated professional, ethical and personal identity is understanding the interaction between one’s personal and professional selves in an ethical context.

GQ9 Influence

Engaging others in a process, idea or vision.

Outcome map

Learning outcomes Graduate qualities
GQ1 GQ2 GQ3 GQ4 GQ5 GQ6 GQ7 GQ8 GQ9

Alignment with Competency standards

Outcomes Competency standards
LO1
Engineers Australia Curriculum Performance Indicators - EAPI
3.1. An ability to communicate with the engineering team and the community at large.
3.6. An ability to function as an individual and as a team leader and member in multi-disciplinary and multi-cultural teams.
5.9. Skills in documenting results, analysing credibility of outcomes, critical reflection, developing robust conclusions, reporting outcomes.
LO2
Engineers Australia Curriculum Performance Indicators - EAPI
3.6. An ability to function as an individual and as a team leader and member in multi-disciplinary and multi-cultural teams.
4.2. Ability to use a systems approach to complex problems, and to design and operational performance.
5.3. Skills in the selection and characterisation of engineering systems, devices, components and materials.
LO3
Engineers Australia Curriculum Performance Indicators - EAPI
4.1. Advanced level skills in the structured solution of complex and often ill defined problems.
4.2. Ability to use a systems approach to complex problems, and to design and operational performance.
LO4
Engineers Australia Curriculum Performance Indicators - EAPI
5.3. Skills in the selection and characterisation of engineering systems, devices, components and materials.
5.5. Skills in the development and application of mathematical, physical and conceptual models, understanding of applicability and shortcomings.
5.8. Skills in recognising unsuccessful outcomes, sources of error, diagnosis, fault-finding and re-engineering.
LO5
Engineers Australia Curriculum Performance Indicators - EAPI
5.3. Skills in the selection and characterisation of engineering systems, devices, components and materials.
5.4. Skills in the selection and application of appropriate engineering resources tools and techniques, appreciation of accuracy and limitations;.
5.5. Skills in the development and application of mathematical, physical and conceptual models, understanding of applicability and shortcomings.
LO6
Engineers Australia Curriculum Performance Indicators - EAPI
1.1. Developing underpinning capabilities in mathematics, physical, life and information sciences and engineering sciences, as appropriate to the designated field of practice.
2.2. Application of enabling skills and knowledge to problem solution in these technical domains.
4.1. Advanced level skills in the structured solution of complex and often ill defined problems.
4.2. Ability to use a systems approach to complex problems, and to design and operational performance.
5.4. Skills in the selection and application of appropriate engineering resources tools and techniques, appreciation of accuracy and limitations;.
5.8. Skills in recognising unsuccessful outcomes, sources of error, diagnosis, fault-finding and re-engineering.

This section outlines changes made to this unit following staff and student reviews.

Assessment has been simplified

Disclaimer

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